miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|224241856|gb|GH674657.1|GH674657 AGAACAGGTCAACAAATCTGTCATGGAGGGCGCGTGCCCAGCGGGCGCGCGAAAGCTCCCAGCCGGAGACTTGTTTCATG
CCGCCGTGTCTGGAGATCCTGAGTGGCTGTGTTTAAGTCTGGAGAGAGTGCAGTCACCAAGTCAGCAGCAGAATAAACAG
GGTCTTACAGTGCTCCACGTGGCTGCTCAACATGGTCAGCTAAATTGCTTGAAACTGCTTCTGGAATCTTGTACTGTGGA
AGTGAATGCATGCTGTCCGCATGGCCGGAGACCGCTACACATGGTGCTGAGCCCAGGGAGCAAGCCAAACTCTTACTGCT
GCCTCACATATCTGCTGGAACATGGAGCAGAACCCAATGTTTCCACAGACGAAGGACTGACCCCACTGCACCTGGCAGCA
GCTGAAGGCCTGAGAGAGTGTGTTGAAGCTCTGGTTAGGGTTGGAGCAGACACACACGCACGTGATAGTCGAGGACACAC
ACCCCTCGAGTACGCTTGCCTGTGGGGTCACAGGGTTGTTGCCAGAATTCTTAAAAACGCAATGTGGCATAGAGATAAGA
AGACAGACATGGAGAAACGCAAAGAACTGCAGAATCTCAAACAGAATATGATCAGGATGCACAGGAAAGCAGAGGGAATG
CAGAAGTTAGCCAGAGAGGCCATTAACACACAGAAGTGTCAGAGTGGGCTGAGAGTAAAGGTCTTCCCTGTCTCA




Most similar to sp|Q4R739|ANR53_MACFA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q4R739|ANR53_MACFA Ankyrin repeat_field domain-containing protein 53
           OS=Macaca fascicularis GN=ANKRD53 PE=2 SV=1
          Length = 496

 Score =  142 bits (359), Expect = 2e-33
 Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 2/185 (1%)
 Frame = +2

Query: 71  LFHAAVSGDPEWL--CLSLERVQSPSQQQNKQGLTVLHVAAQHGQLNCLKLLLESCTVEV 244
           LF AAV G+ EWL  CL+    + P+  +   G T +H AAQ G+L CL++L+E     V
Sbjct: 78  LFAAAV-GNVEWLRFCLNQSLREIPTDYK---GFTAIHFAAQRGKLACLQVLVEEYKFPV 133

Query: 245 NACCPHGRRPLHMVLSPGSKPNSYCCLTYLLEHGAEPNVSTDEGLTPLHLAAAEGLRECV 424
           N    + + PLH+V+   +   +  C+ YLLE GA  N  T  G TPLHLA  EGL +CV
Sbjct: 134 NLLTNNSQTPLHLVIHKDNTTVALPCIYYLLEKGAALNAQTCNGCTPLHLAVREGLLDCV 193

Query: 425 EALVRVGADTHARDSRGHTPLEYACLWGHRVVARILKNAMWHRDKKTDMEKRKELQNLKQ 604
           + LV+ GA+ HA+D+ G+ P+++  +W HR  AR LK+AMW +DKK    + ++++ LK 
Sbjct: 194 KVLVQSGANVHAQDAMGYKPIDFCKIWNHRACARFLKDAMWKKDKKDFACEMRKMKTLKS 253

Query: 605 NMIRM 619
            +  M
Sbjct: 254 QLALM 258